Here's how the missions will work for the story since it is a harem after all.

47 will take out the male target while you work on charming the female target who will fall in love with you, still trying to figure out how to get away with it several times.

If there are more than two targets and there are several males, you and 47 will split them up evenly.

An example is you take out Rose while 47 takes out Burg but you guys will get to pick which target you'll take out, makes sense?.

Also, 47, has the alias of Tobias Rieper.  I want a sort of fake name for you, so, if you happen to think of one, let me know.